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DMS are now locked when used by a command. Added checks and changed

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cleaning mechanisms.
This commit is contained in:
Celine Mercier
2019-09-20 20:37:19 +02:00
parent eb6c59dc1e
commit 783a1343c4
14 changed files with 378 additions and 28 deletions
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6
src/obi_ecotag.c
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@ -274,7 +274,7 @@ int obi_ecotag(const char* dms_name,
best_match_ids_buffer_size = 1024;
// Open main DMS containing the query sequences and where the output will be written
dms = obi_open_dms(dms_name);
dms = obi_open_dms(dms_name, false);
if (dms == NULL)
{
obidebug(1, "\nError opening the DMS containing the query sequences for ecotag");
@ -282,7 +282,7 @@ int obi_ecotag(const char* dms_name,
}
// Open the DMS containing the reference database (can be the same or not)
ref_dms = obi_open_dms(ref_dms_name);
ref_dms = obi_open_dms(ref_dms_name, false);
if (ref_dms == NULL)
{
obidebug(1, "\nError opening the DMS containing the reference database for ecotag");
@ -290,7 +290,7 @@ int obi_ecotag(const char* dms_name,
}
// Open the DMS containing the taxonomy (can be the same or not)
taxo_dms = obi_open_dms(taxo_dms_name);
taxo_dms = obi_open_dms(taxo_dms_name, false);
if (taxo_dms == NULL)
{
obidebug(1, "\nError opening the DMS containing the taxonomy for ecotag");