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Sequence alignment: added the possibility to specify the index of the

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sequences to align in a column containing multiple sequences per line (C
level for now)
This commit is contained in:
Celine Mercier
2016-11-29 16:15:02 +01:00
parent 5fb025f310
commit 98d0849653
6 changed files with 26 additions and 11 deletions
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src/obi_align.h
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@ -49,7 +49,7 @@
* @since May 2016
* @author Celine Mercier (celine.mercier@metabarcoding.org)
*/
int obi_align_one_column(Obiview_p seq_view, OBIDMS_column_p seq_column,
int obi_align_one_column(Obiview_p seq_view, OBIDMS_column_p seq_column, const char* seq_name,
Obiview_p score_view, OBIDMS_column_p id1_column, OBIDMS_column_p id2_column, OBIDMS_column_p score_column,
double threshold, bool normalize, int reference, bool similarity_mode);