Fixed missing email address
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@ -4,7 +4,7 @@
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/**
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/**
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* @file obi_align.h
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* @file obi_align.h
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* @author Celine Mercier
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* @author Celine Mercier (celine.mercier@metabarcoding.org)
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* @date May 11th 2016
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* @date May 11th 2016
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* @brief Header file for the functions handling the LCS alignment of DNA sequences.
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* @brief Header file for the functions handling the LCS alignment of DNA sequences.
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*/
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*/
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@ -77,7 +77,7 @@
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* the length of the Longest Common Subsequence. If the score is not normalized and expressed in distance,
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* the length of the Longest Common Subsequence. If the score is not normalized and expressed in distance,
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* it is (reference length - LCS length). Only sequence pairs with a similarity above the threshold are printed.
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* it is (reference length - LCS length). Only sequence pairs with a similarity above the threshold are printed.
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* @param normalize Whether the score should be normalized with the reference sequence length.
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* @param normalize Whether the score should be normalized with the reference sequence length.
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* @param reference The reference length. 0: The alignement length; 1: The longest sequence's length; 2: The shortest sequence's length.
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* @param reference The reference length. 0: The alignment length; 1: The longest sequence's length; 2: The shortest sequence's length.
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* @param similarity_mode Whether the score should be expressed in similarity (true) or distance (false).
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* @param similarity_mode Whether the score should be expressed in similarity (true) or distance (false).
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*
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*
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* @returns A value indicating the success of the operation.
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* @returns A value indicating the success of the operation.
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