Various non-important fixes and comments
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@ -70,7 +70,6 @@ def run(config):
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cdef Column def_col
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cdef Column seq_col
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cdef Column qual_col
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cdef Column taxid_col
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cdef Column old_column
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cdef bint rewrite
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cdef dict dcols
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@ -26,12 +26,3 @@ def run(config):
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print(repr(input[1]))
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@ -37,7 +37,7 @@ def addOptions(parser):
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group.add_argument('--merge-ids', '-e',
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action="store_true", dest="uniq:mergeids",
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default=False,
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help="ONLY WORKING ON SMALL SETS FOR NOW Add the merged key with all ids of merged sequences.")
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help="ONLY WORKING ON SMALL SETS FOR NOW Add the merged key with all ids of merged sequences.") # TODO ?
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group.add_argument('--category-attribute', '-c',
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action="append", dest="uniq:categories",
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@ -601,7 +601,7 @@ cdef class Line_selection(list):
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cpdef View materialize(self,
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object view_name,
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object comments=""):
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object comments=b""):
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cdef bytes view_name_b = tobytes(view_name)
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cdef bytes comments_b
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