Various non-important fixes and comments

This commit is contained in:
Celine Mercier
2018-07-28 17:07:17 +02:00
parent 895d09b133
commit b98880b7fa
10 changed files with 6 additions and 20 deletions

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@ -70,7 +70,6 @@ def run(config):
cdef Column def_col
cdef Column seq_col
cdef Column qual_col
cdef Column taxid_col
cdef Column old_column
cdef bint rewrite
cdef dict dcols

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@ -26,12 +26,3 @@ def run(config):
print(repr(input[1]))

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@ -37,7 +37,7 @@ def addOptions(parser):
group.add_argument('--merge-ids', '-e',
action="store_true", dest="uniq:mergeids",
default=False,
help="ONLY WORKING ON SMALL SETS FOR NOW Add the merged key with all ids of merged sequences.")
help="ONLY WORKING ON SMALL SETS FOR NOW Add the merged key with all ids of merged sequences.") # TODO ?
group.add_argument('--category-attribute', '-c',
action="append", dest="uniq:categories",

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@ -601,7 +601,7 @@ cdef class Line_selection(list):
cpdef View materialize(self,
object view_name,
object comments=""):
object comments=b""):
cdef bytes view_name_b = tobytes(view_name)
cdef bytes comments_b