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DNA sequences and character strings are now handled using AVL trees.

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This commit is contained in:
Celine Mercier
2015-12-11 17:24:44 +01:00
parent 1586956d57
commit c139367555
26 changed files with 2178 additions and 1711 deletions
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8
src/obidmscolumn_seq.h
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@ -23,7 +23,7 @@
/**
* @brief Sets a value in an OBIDMS column containing data in the form of indices referring
* to DNA sequences in an obiarray, using the index of the element in the line.
* to DNA sequences in an AVL tree, using the index of the element in the line.
*
* @warning Pointers returned by obi_open_column() don't allow writing.
*
@ -44,7 +44,7 @@ int obi_column_set_obiseq_with_elt_idx(OBIDMS_column_p column, index_t line_nb,
/**
* @brief Recovers a value in an OBIDMS column containing data in the form of indices referring
* to DNA sequences in an obiarray, using the index of the element in the line.
* to DNA sequences in an AVL tree, using the index of the element in the line.
*
* @param column A pointer as returned by obi_create_column().
* @param line_nb The number of the line where the value should be recovered.
@ -61,7 +61,7 @@ const char* obi_column_get_obiseq_with_elt_idx(OBIDMS_column_p column, index_t l
/**
* @brief Sets a value in an OBIDMS column containing data in the form of indices referring
* to DNA sequences in an obiarray, using the name of the element in the line.
* to DNA sequences in an AVL tree, using the name of the element in the line.
*
* @warning Pointers returned by obi_open_column() don't allow writing.
*
@ -82,7 +82,7 @@ int obi_column_set_obiseq_with_elt_name(OBIDMS_column_p column, index_t line_nb,
/**
* @brief Recovers a value in an OBIDMS column containing data in the form of indices referring
* to DNA sequences in an obiarray, using the name of the element in the line.
* to DNA sequences in an AVL tree, using the name of the element in the line.
*
* @param column A pointer as returned by obi_create_column() or obi_clone_column().
* @param line_nb The number of the line where the value should be recovered.