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build_ref_db: set default threshold to 0.99

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mercierc
2021-06-01 09:11:17 +12:00
parent 6b732d11d3
commit c2f3d90dc1
1 changed files with 2 additions and 3 deletions
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5
python/obitools3/commands/build_ref_db.pyx
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@ -31,10 +31,9 @@ def addOptions(parser):
group.add_argument('--threshold','-t', group.add_argument('--threshold','-t',
action="store", dest="build_ref_db:threshold", action="store", dest="build_ref_db:threshold",
metavar='<THRESHOLD>', metavar='<THRESHOLD>',
default=0.0, default=0.99,
type=float, type=float,
help="Score threshold as a normalized identity, e.g. 0.95 for an identity of 95%%. Default: 0.00" help="Score threshold as a normalized identity, e.g. 0.95 for an identity of 95%%. Default: 0.99.")
" (no threshold).")
def run(config): def run(config):