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Obiblob_indexer API

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This commit is contained in:
Celine Mercier
2016-04-12 14:53:33 +02:00
parent cd4e65e190
commit d8107533d8
21 changed files with 252 additions and 131 deletions
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4
python/obitools3/obidms/_obidms.cfiles
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@ -28,3 +28,7 @@
../../../src/crc64.h
../../../src/utils.c
../../../src/utils.h
../../../src/obiblob.c
../../../src/obiblob.h
../../../src/obiblob_indexer.c
../../../src/obiblob_indexer.h

2
python/obitools3/obidms/_obidms.pxd
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@ -56,7 +56,7 @@ cdef class OBIView:
index_t nb_lines=*,
index_t nb_elements_per_line=*,
list elements_names=*,
str avl_name=*,
str indexer_name=*,
str comments=*,
bint create=*
)

4
python/obitools3/obidms/_obidms.pyx
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@ -352,7 +352,7 @@ cdef class OBIView :
index_t nb_lines=0,
index_t nb_elements_per_line=1, # TODO 1?
list elements_names=None,
str avl_name="default_AVL_tree",
str indexer_name="default_indexer",
str comments="",
bint create=True # TODO
) :
@ -388,7 +388,7 @@ cdef class OBIView :
if (obi_view_add_column(self.pointer, column_name_b, version_number, # should return pointer on column?
data_type, nb_lines, nb_elements_per_line,
elements_names_b, str2bytes(avl_name),
elements_names_b, str2bytes(indexer_name),
str2bytes(comments), create) < 0) :
raise Exception("Problem adding a column in a view")

4
python/obitools3/obidms/capi/obidmscolumn.pxd
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@ -27,7 +27,7 @@ cdef extern from "obidmscolumn.h" nogil:
obiversion_t version
obiversion_t cloned_from
const_char_p name
const_char_p avl_name
const_char_p indexer_name
const_char_p comments
ctypedef OBIDMS_column_header_t* OBIDMS_column_header_p
@ -45,7 +45,7 @@ cdef extern from "obidmscolumn.h" nogil:
index_t nb_lines,
index_t nb_elements_per_line,
const_char_p elements_names,
const_char_p avl_name,
const_char_p indexer_name,
const_char_p comments)
OBIDMS_column_p obi_open_column(OBIDMS_p dms,

2
python/obitools3/obidms/capi/obiview.pxd
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@ -90,7 +90,7 @@ cdef extern from "obiview.h" nogil:
index_t nb_lines,
index_t nb_elements_per_line,
const_char_p elements_names,
const_char_p avl_name,
const_char_p indexer_name,
const_char_p comments,
bint create)