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Views: Files for unfinished views now have the extension

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'.obiview_unfinished', renamed to '.obiview' when the view is finished.
This commit is contained in:
Celine Mercier
2017-02-07 17:16:09 +01:00
parent a9102620f5
commit e524041013
5 changed files with 384 additions and 214 deletions
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2
python/obitools3/obidms/_obidms.pyx
View File

@ -690,7 +690,7 @@ cdef class OBIDMS :
cdef int i, j
cdef str column_name
view_infos_p = obi_view_map_file(self._pointer, str2bytes(view_name))
view_infos_p = obi_view_map_file(self._pointer, str2bytes(view_name), True)
view_infos_d = {}
view_infos_d["name"] = bytes2str(view_infos_p.name)
view_infos_d["comments"] = bytes2str(view_infos_p.comments)

8
python/obitools3/obidms/capi/obiview.pxd
View File

@ -68,7 +68,7 @@ cdef extern from "obiview.h" nogil:
Obiview_p obi_new_view_nuc_seqs_cloned_from_name(OBIDMS_p dms, const_char_p view_name, const_char_p view_to_clone_name, index_t* line_selection, const_char_p comments, bint quality_column)
Obiview_infos_p obi_view_map_file(OBIDMS_p dms, const char* view_name)
Obiview_infos_p obi_view_map_file(OBIDMS_p dms, const char* view_name, bint finished)
int obi_view_unmap_file(OBIDMS_p dms, Obiview_infos_p view_infos)
@ -94,11 +94,7 @@ cdef extern from "obiview.h" nogil:
OBIDMS_column_p* obi_view_get_pointer_on_column_in_view(Obiview_p view, const_char_p column_name)
int obi_view_create_column_alias(Obiview_p view, const_char_p current_name, const_char_p alias)
int obi_save_view(Obiview_p view)
int obi_close_view(Obiview_p view)
int obi_view_create_column_alias(Obiview_p view, const_char_p current_name, const_char_p alias)
int obi_save_and_close_view(Obiview_p view)