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obi stats: improved display with str instead of bytes

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Celine Mercier
2019-09-10 16:20:36 +02:00
parent bc55c5ef8c
commit f8d1fa678a
1 changed files with 2 additions and 1 deletions
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python/obitools3/commands/stats.pyx
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@ -7,6 +7,7 @@ from obitools3.apps.optiongroups import addMinimalInputOption, addTaxonomyOption
from obitools3.dms.view import RollbackException from obitools3.dms.view import RollbackException
from obitools3.apps.config import logger from obitools3.apps.config import logger
from obitools3.dms.capi.obiview cimport COUNT_COLUMN from obitools3.dms.capi.obiview cimport COUNT_COLUMN
from obitools3.utils cimport tostr
from functools import reduce from functools import reduce
import math import math
@ -248,7 +249,7 @@ def run(config):
for i in range(len(sorted_stats)): for i in range(len(sorted_stats)):
c = sorted_stats[i][0] c = sorted_stats[i][0]
for v in c: for v in c:
print(pcat % str(v)+"\t", end="") print(pcat % tostr(v)+"\t", end="")
for m in config['stats']['minimum']: for m in config['stats']['minimum']:
print((("%%%dd" % lmini[m]) % mini[m][c])+"\t", end="") print((("%%%dd" % lmini[m]) % mini[m][c])+"\t", end="")
for m in config['stats']['maximum']: for m in config['stats']['maximum']: