obitools/obitools3
2
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases 66 Wiki Activity

clean_dms: now works with extension

Browse Source
This commit is contained in:
Celine Mercier
2019-12-12 17:02:50 +01:00
parent d75e54a078
commit fc3ac03630
1 changed files with 4 additions and 1 deletions
Download Patch File Download Diff File Expand all files Collapse all files

5
python/obitools3/commands/clean_dms.pyx
View File

@ -21,7 +21,10 @@ def run(config):
logger("info", "obi clean_dms") logger("info", "obi clean_dms")
if obi_clean_dms(tobytes(config['obi']['inputURI'])) < 0 : dms_path = tobytes(config['obi']['inputURI'])
if b'.obidms' in dms_path:
dms_path = dms_path.split(b'.obidms')[0]
if obi_clean_dms(dms_path) < 0 :
raise Exception("Error cleaning DMS", config['obi']['inputURI']) raise Exception("Error cleaning DMS", config['obi']['inputURI'])
logger("info", "Done.") logger("info", "Done.")