Commit Graph

14 Commits

Author SHA1 Message Date
6a8df069ad Indexers are now cloned if needed to modify them after they've been
closed. Obligatory indexers' names now follow the same pattern as other
indexers (columnname_version). Closes #46 and #49.
2016-05-18 13:23:48 +02:00
b3c47809da First version of alignment functions (imported from suma* programs) 2016-05-11 16:36:23 +02:00
d8107533d8 Obiblob_indexer API 2016-04-12 14:53:33 +02:00
019dfc01b4 Branch to refactor and debug (AVLs bugged) 2016-04-08 15:38:57 +02:00
21d1b2ed3e First implementation of taxonomy reading 2016-03-11 13:56:38 +01:00
a8f03248a8 Major update : views 2016-02-18 10:38:51 +01:00
c139367555 DNA sequences and character strings are now handled using AVL trees. 2015-12-11 17:24:44 +01:00
f6ec8ba963 The header size is now directly read in the file when a column or an
array is opened.
2015-11-09 17:50:32 +01:00
9b066f4327 Major update: obiarrays with columns containing indices referring to
character strings.
2015-11-06 17:55:15 +01:00
456551ffeb obi arrays that don't work because of cython bug passing wrong pointers 2015-11-03 14:22:00 +01:00
4b7f2d268b Doxygen documentation corrected and completed. 2015-09-30 12:03:46 +02:00
61b6c3ce83 Added OBI errnos but work in progress 2015-06-23 17:56:21 +02:00
5d967f5b7b fixed typos and other minor things 2015-06-10 15:19:02 +02:00
5e3e6f93c0 Add a mecanism similar to the classical errno system for reporting error
but specific to the OBITools framwork
2015-05-23 14:54:48 +03:00