Commit Graph

9 Commits

Author SHA1 Message Date
9f38cd8cf6 updated a comment 2019-07-23 19:03:24 +02:00
da445066f3 C alignment filter: added a check for sequences not being equal when the
threshold requires that they are
2018-12-09 19:14:51 +01:00
d1f1fd432e Minor fixes 2018-11-07 16:04:17 +01:00
e18b762d81 Weird buggy Eclipse commit with nothing changed 2018-10-21 17:35:18 +02:00
f03928c679 Committing minor comments before merging branch with master 2017-07-06 10:56:39 +02:00
303bd6f445 Added function to build kmer table for 2 columns, and fixed bug (with
line count) when building kmer table of one column
2016-12-16 19:10:18 +01:00
98d0849653 Sequence alignment: added the possibility to specify the index of the
sequences to align in a column containing multiple sequences per line (C
level for now)
2016-11-29 16:15:02 +01:00
8ce6f6c80b Added an argument to specify whether the two sequences can be identical
when applying filters before aligning
2016-11-28 11:38:02 +01:00
70c49e214a Added the kmer filter to LCS alignments, and now obiblobs containing
encoded sequences are directly put in int16_t arrays for the alignment
2016-11-18 16:29:28 +01:00