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Code Issues Pull Requests Actions Packages Projects Releases 66 Wiki Activity
707 Commits 18 Branches 66 Tags
74be3c39f0c6b550c6c6ca9cad987cbee36c70eb
Commit Graph

12 Commits

Author SHA1 Message Date
Celine Mercier
b98880b7fa Various non-important fixes and comments 2018-07-28 17:07:17 +02:00
Celine Mercier
d10192ab0e C functions to detect IUPAC sequences 2017-07-05 17:26:03 +02:00
Celine Mercier
c7b8db6a2e Replaced malloc+memset with calloc 2016-04-21 13:45:39 +02:00
Celine Mercier
be05c889e2 DNA_seq_indexer API 2016-04-12 16:38:47 +02:00
Celine Mercier
375bfcce8a Renamed "Obi_byte_arrays" to "Obiblobs" and moved Obiblob functions to
separate obiblob.c and obiblob.h files
2016-04-12 11:21:14 +02:00
Celine Mercier
019dfc01b4 Branch to refactor and debug (AVLs bugged) 2016-04-08 15:38:57 +02:00
Celine Mercier
6bd42132c4 Minor fixes to silence warnings and replaced two asprintf uses 2016-03-23 12:58:53 +01:00
Celine Mercier
c139367555 DNA sequences and character strings are now handled using AVL trees. 2015-12-11 17:24:44 +01:00
Celine Mercier
b45b496b0e Major update: new type of columns containing indices referring to lines
in other columns
2015-11-29 11:57:07 +01:00
Celine Mercier
6aa2f92930 DNA sequences are now encoded on 4 bits when they are in IUPAC 2015-11-20 15:32:09 +01:00
Celine Mercier
87044b41d8 modified the encoding function on 2 bits a little 2015-11-20 11:32:47 +01:00
Celine Mercier
6ab1c83302 New column type for DNA sequences. Only for those coded on 2 bits (only
'ATGCatgc') for now.
2015-11-19 18:12:48 +01:00
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