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b9b4cec5b5
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import: now can import SILVA fasta files
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2020-10-30 10:43:04 +01:00 |
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1dcdf69f1f
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export: fixed a bug introduced in version 3.0.0b28
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2020-07-28 09:31:05 +02:00 |
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8aa455ad8a
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Python: made all commands handle output to buffer object (e.g. stdout)
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2020-07-24 16:09:48 +02:00 |
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52920c3c71
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URI decoding: dirty temp fix for bug where default dms makes a mess when
should guess file
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2020-02-02 21:11:05 +01:00 |
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be85c55c9e
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Python: URIs: fixed bug on linux systems
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2019-09-25 14:41:52 +02:00 |
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0159385943
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URI decoding: fixed bug with dms-only URI
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2019-09-17 12:50:37 +02:00 |
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88451116e8
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URIs: added stdout output (empty URI)
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2019-09-17 12:28:10 +02:00 |
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53dcbc8ea3
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Fixed log to be in str instead of bytes
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2019-08-29 18:26:51 +02:00 |
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2b8c066f8e
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Cython: added possibility to output in tabular format
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2019-03-31 15:39:38 +02:00 |
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3445579251
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remove all the no more needed .cfiles
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2019-03-29 16:56:58 +01:00 |
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7e20870719
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Added genbank parser
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2019-03-15 16:06:27 +01:00 |
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24a63f8732
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URIs: URIs built with autocomplete now work too
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2019-03-15 10:52:27 +01:00 |
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d88390c6d8
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Cython API: when importing a file in a DMS, its length is computed
beforehand for the progress bar
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2019-03-13 18:35:32 +01:00 |
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29c56572cf
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Add cfiles everywhere ;-)
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2019-02-19 15:04:30 +01:00 |
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8faabd3ebf
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Cython, URI: Fixed a bug when using an output URI with just a view name
to use the default DMS
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2018-11-02 19:04:27 +01:00 |
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123e5dc0ac
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Cython URI API: added an argument to only open the DMS and return the
rest as a character string
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2018-10-31 14:45:17 +01:00 |
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e18b762d81
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Weird buggy Eclipse commit with nothing changed
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2018-10-21 17:35:18 +02:00 |
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0a0f0682a9
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Better handling of errors and exceptions when new view name already
exists
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2018-10-17 19:47:40 +02:00 |
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da0e3d4043
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Cython: added full handling of NA strings when importing files
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2018-10-17 16:41:15 +02:00 |
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135d3b6e67
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Cython: updated the URI decoding to handle outputs other than DMS
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2018-10-17 11:21:29 +02:00 |
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c02c15b93f
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Cython API: URI decoding now returns the character string with the
object path if it could not be opened
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2018-07-28 17:00:42 +02:00 |
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62614a8538
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Cython API: fixed a bug in URI decoding and option handling where the
quality offset would not be read properly
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2018-05-17 15:10:52 +02:00 |
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15e43bb9a1
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Cython API: obi import can now import ngsfilter files and tabular files
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2018-03-12 18:10:43 +01:00 |
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00993d4215
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Cython API: fixed a bug where the quality format would not be read
properly from the configuration values
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2018-02-12 14:42:30 +01:00 |
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fb9b219abe
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Fixed a bug with taxonomy URIs not being read correctly
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2017-10-04 16:00:30 +02:00 |
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74f15d1a23
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Cython API: Various fixes in input handlers (parsers, openers etc).
Mostly working but not bug-free
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2017-08-20 17:37:51 +02:00 |
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407f61a408
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Add the possibility to create temporary objects like a temporary
directory and a temporary DMS
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2017-07-28 16:33:19 +02:00 |
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b9c65a871f
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Patch decoding of URL
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2017-07-28 12:41:28 +02:00 |
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7112f44fb7
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Bug fixes for input handlers, openers, parsers etc. Compiling but not
tested
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2017-07-27 19:42:44 +02:00 |
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949e5f9baf
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Make a first full version of the URI decoder
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2017-07-27 16:04:31 +02:00 |
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28259cd88b
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Beginning of URI decoder -- !!! NOT YET FULLY IMPLEMENTED !!!
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2017-07-25 13:05:58 +02:00 |
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