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783a1343c4
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DMS are now locked when used by a command. Added checks and changed
cleaning mechanisms.
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2019-09-20 20:37:19 +02:00 |
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362df50fe9
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Removed a deprecated element from the DMS structure
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2018-11-07 13:36:08 +01:00 |
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e18b762d81
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Weird buggy Eclipse commit with nothing changed
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2018-10-21 17:35:18 +02:00 |
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8ce6dd6d1a
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Updated prototypes with no arguments with a void argument as suggested
by compilation warnings
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2018-10-17 12:00:40 +02:00 |
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2736a92699
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DMS: implemented full information file with JSON formatted comments
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2018-10-07 18:53:25 +02:00 |
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9e3ac477eb
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OBIDMS: Opened DMS now have a counter associated so that DMS are not
actually opened several times by the same program, which triggers the
cleaning of unfinished views and columns (to discuss)
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2017-11-24 17:58:47 +01:00 |
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04e065094a
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All DMS opened by a program are now listed and closed with atexit system
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2017-10-16 10:35:07 +02:00 |
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4b86aa67a8
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New C functions to import a column and a view from a DMS to another DMS
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2017-08-03 16:33:12 +02:00 |
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cb5ad2ed2d
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Added functions to try to open a DMS if it exists
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2017-07-05 15:38:22 +02:00 |
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b63d0fb9fb
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Added C functions to write .rdx, .tdx, .ndx binary taxonomy files from a
taxonomy C structure
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2016-10-14 17:03:10 +02:00 |
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b408a4f6eb
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Changed file name limits to adapt to system limits + minor changes
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2016-09-22 18:05:07 +02:00 |
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802bae110b
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Removed deprecated function
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2016-09-21 17:09:59 +02:00 |
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acc0da2d0b
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Readjusted some limits for file names and file numbers to be under OS
limits
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2016-09-05 12:39:04 +02:00 |
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0869b9ba3f
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Closes issue #47 by storing each view in a separate file named with the
view's name and created upon view creation.
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2016-06-30 11:41:30 +02:00 |
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a32920e401
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Relative paths when creating or opening a DMS now work
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2016-04-29 17:46:36 +02:00 |
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5bd12079ae
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Added comments about listing columns and indexers in obidms functions
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2016-04-29 16:06:01 +02:00 |
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22e3c3eeed
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Updated the documentation for obidms functions
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2016-04-22 11:28:09 +02:00 |
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2aafecc3b5
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Changed sequence 'description' to 'definition' everywhere
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2016-04-15 16:31:43 +02:00 |
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527d3555f0
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Moved the functions getting full paths for files and directories to
obidms.c/.h files
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2016-04-15 11:11:13 +02:00 |
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71492ad229
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Made the handling of listing and unlisting opened columns and indexers
functions in the obidms files.
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2016-04-15 10:49:12 +02:00 |
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d8107533d8
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Obiblob_indexer API
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2016-04-12 14:53:33 +02:00 |
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019dfc01b4
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Branch to refactor and debug (AVLs bugged)
|
2016-04-08 15:38:57 +02:00 |
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21d1b2ed3e
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First implementation of taxonomy reading
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2016-03-11 13:56:38 +01:00 |
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a8f03248a8
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Major update : views
|
2016-02-18 10:38:51 +01:00 |
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c139367555
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DNA sequences and character strings are now handled using AVL trees.
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2015-12-11 17:24:44 +01:00 |
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1586956d57
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Added the lists of opened columns and arrays in the OBIDMS structure,
and a counter in the OBIDMS column structure; fixed some bugs and
created tests for referring columns that are bound to disappear anyway.
|
2015-12-02 17:32:07 +01:00 |
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dbf9463238
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The endianness of a DMS is now stored in the OBIDMS structure
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2015-11-18 15:35:09 +01:00 |
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e8417b4f6f
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The endianness of an OBIDMS is now stored in an informations file that
is read when opening the OBIDMS.
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2015-11-16 14:37:51 +01:00 |
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b37bd8f21c
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File descriptors for dms, column and array directories are now stored in
structures.
|
2015-11-09 15:06:02 +01:00 |
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9b066f4327
|
Major update: obiarrays with columns containing indices referring to
character strings.
|
2015-11-06 17:55:15 +01:00 |
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456551ffeb
|
obi arrays that don't work because of cython bug passing wrong pointers
|
2015-11-03 14:22:00 +01:00 |
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4b7f2d268b
|
Doxygen documentation corrected and completed.
|
2015-09-30 12:03:46 +02:00 |
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2698022aaf
|
New OBIDMS method to list the columns of an OBIDMS
|
2015-09-15 17:09:31 +02:00 |
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5f62cd8526
|
C sources modified to add the handling of OBIDM columns with the type
OBI_INT, and the handling of multiple types in general
|
2015-07-31 18:03:48 +02:00 |
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152b34b5f4
|
Closes #10 : column groups stored in directories
|
2015-06-23 18:35:34 +02:00 |
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ed662077b3
|
fixed bugs and typos in the obidms and obidmscolumn source and header
files
|
2015-06-17 16:51:16 +02:00 |
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5d967f5b7b
|
fixed typos and other minor things
|
2015-06-10 15:19:02 +02:00 |
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d1324618b8
|
Makes few cleanning and adds an obi_dms C constructor
|
2015-05-26 21:36:55 +02:00 |
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6248160eeb
|
C Syntax error patches
|
2015-05-26 10:38:56 +02:00 |
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57db677d1f
|
First minimal implementation of what should be the creation, opening and
closing of an OBIDMS
|
2015-05-23 16:29:06 +03:00 |
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