Commit Graph

13 Commits

Author SHA1 Message Date
8aa455ad8a Python: made all commands handle output to buffer object (e.g. stdout) 2020-07-24 16:09:48 +02:00
aab59f2214 obi clean: fixed a memory bug, fixed the behaviour when no sample info,
and added checks warnings and error handling when sample info not
dereplicated
2020-07-01 18:17:47 +02:00
4d0299904e all commands (almost): cleaner DMS closing at the end 2020-04-12 17:31:58 +02:00
66441e0aef Fixed a bug when sending a DMS path to a C function from Cython 2019-08-18 19:43:51 +02:00
13952358b3 Fixed a bug where some commands wouldn't work if the input DMS was not
in the current directory
2019-07-25 11:59:19 +02:00
3d9f0352ff obiclean parallelized 2019-06-20 19:44:04 +02:00
a04588da31 openmp on j loop (i loop probably better) 2019-05-24 16:51:04 +02:00
478d19ab43 Cleaner stderr prints 2019-03-13 18:36:31 +01:00
d1f1fd432e Minor fixes 2018-11-07 16:04:17 +01:00
35f3e7c30b All commands now handle outputing to another DMS + small fixes 2018-11-02 19:03:09 +01:00
58589e04be Cython: rearranged input and output format options to have both and
updated commands accordingly
2018-10-17 11:19:48 +02:00
e9a41c5b97 Commands: updated for JSON formatted comments with history 2018-10-07 19:10:34 +02:00
6911bf4d70 obi clean: first version 2018-05-18 14:26:54 +02:00