|
|
9672f01c6a
|
alignpairedend: improved/fixed the output tags for the alignment score
and lengths. Removed minimum score option
|
2020-07-13 15:59:50 +02:00 |
|
|
|
687e42ad22
|
C: kmer alignment: fixed a bug where scores of 0 were at
(0+kmer_length-1) (and now setting alignment direction to None if score
is 0
|
2020-06-05 16:09:33 +02:00 |
|
|
|
d99702f56f
|
ngsfilter and alignpairedend: paired-end reads are now correctly
reversed and labeled to be aligned correctly by alignpairedend
|
2019-07-23 18:56:51 +02:00 |
|
|
|
86bfa96fbe
|
C: kmer similarity: small improvements
|
2019-07-06 16:30:32 +02:00 |
|
|
|
ee9947217c
|
alignpairedend: fixed the worst memory leak and the handling of the case
where 0 common kmers are found
|
2019-03-29 11:16:25 +01:00 |
|
|
|
e026e9ec83
|
Fixed the new alignpaired end to work after ngsfilter with the 9879847
possible cases
|
2019-02-17 18:32:35 +01:00 |
|
|
|
3015310535
|
Fixed a bug in kmer similarity computation where the fact that sequences
could be switched was not accounted for
|
2019-02-10 21:02:24 +01:00 |
|
|
|
c7f5b8d980
|
Alignpairedend: added alignment using shifting with best kmer similarity
(low level layer in C and Cython API)
|
2019-01-21 17:30:46 +01:00 |
|
