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ffc68d448f
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Deleted a forgotten print statement
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2016-02-18 15:15:42 +01:00 |
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a8f03248a8
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Major update : views
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2016-02-18 10:38:51 +01:00 |
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c139367555
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DNA sequences and character strings are now handled using AVL trees.
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2015-12-11 17:24:44 +01:00 |
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1586956d57
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Added the lists of opened columns and arrays in the OBIDMS structure,
and a counter in the OBIDMS column structure; fixed some bugs and
created tests for referring columns that are bound to disappear anyway.
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2015-12-02 17:32:07 +01:00 |
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b45b496b0e
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Major update: new type of columns containing indices referring to lines
in other columns
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2015-11-29 11:57:07 +01:00 |
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2cf10cb6f0
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Column type is now passed as a character string when creating the column
(either 'OBI_INT', 'OBI_FLOAT', 'OBI_BOOL', 'OBI_CHAR', 'OBI_STR' or
'OBI_SEQ')
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2015-11-23 15:48:27 +01:00 |
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6ab1c83302
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New column type for DNA sequences. Only for those coded on 2 bits (only
'ATGCatgc') for now.
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2015-11-19 18:12:48 +01:00 |
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e8417b4f6f
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The endianness of an OBIDMS is now stored in an informations file that
is read when opening the OBIDMS.
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2015-11-16 14:37:51 +01:00 |
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6579566c6e
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Minor changes in code to improve readability and fix C compilation
warnings
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2015-11-10 14:37:58 +01:00 |
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410e2e02a0
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When retrieving the header of a column, the version number of the column
wanted can now be provided.
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2015-11-10 13:30:10 +01:00 |
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c4b7e579cf
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Comments in column headers are now working.
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2015-11-10 10:56:45 +01:00 |
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0e3d6ed2d7
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Methods __len__ (number of lines used) and __sizeof__ (total size in
bytes) implemented for columns.
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2015-11-09 15:56:20 +01:00 |
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9b066f4327
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Major update: obiarrays with columns containing indices referring to
character strings.
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2015-11-06 17:55:15 +01:00 |
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456551ffeb
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obi arrays that don't work because of cython bug passing wrong pointers
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2015-11-03 14:22:00 +01:00 |
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ecb9d97adb
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Reorganized the code to have less functions, and the functions to get
and format the creation date of a column are now working.
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2015-10-15 15:12:45 +02:00 |
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0eaa5aa784
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Major changes : new cython subclasses to handle columns with multiple
elements per line in a more efficient way + now elements_names are
passed as a list + new function to recover only the header of a column
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2015-10-14 18:05:34 +02:00 |
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b553eef781
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Method to close a DMS is uncommented but not complete yet (columns have
to be closed separately)
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2015-10-08 10:44:13 +02:00 |
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392f110c8d
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new functions in the OBIDMS_column class to raise NotImplementedError
exceptions and to get the creation date of a column
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2015-10-02 13:51:26 +02:00 |
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72155c3b73
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entirely reworked cython wrapper
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2015-09-28 13:51:35 +02:00 |
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0951934f77
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test
|
2015-09-25 11:28:23 +02:00 |
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