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Update Wolf tutorial with the OBITools3

Celine Mercier
2021-04-19 05:28:33 +02:00
parent c984bf0928
commit 200cdc2b1a
1 changed files with 2 additions and 2 deletions
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Wolf-tutorial-with-the-OBITools3.md

@ -106,7 +106,7 @@ Otherwise, to build the database yourself from the start:
mkdir EMBL
cd EMBL
wget -nH --cut-dirs=5 -A rel_std_*.dat.gz -R rel_std_hum_*.dat.gz,rel_std_env_*.dat.gz -m ftp://ftp.ebi.ac.uk/pub/databases/embl/release/std/
wget -nH --cut-dirs=5 -A rel_std_*.dat.gz -R rel_std_hum_*.dat.gz,rel_std_env_*.dat.gz -m https://ftp.ebi.ac.uk/pub/databases/embl/release/std/
cd ..
2. Import the sequences in the DMS:
@ -119,7 +119,7 @@ For EMBL files, you can give the path to a directory with several EMBL files.
3. Download the taxonomy:
wget ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz
wget https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz
4. Import the taxonomy in the DMS: