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Update Installing the OBITools3

Celine Mercier
2019-12-13 11:21:18 +01:00
parent 938494aa4b
commit c0b81cc0ad
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Installing-the-OBITools3.md

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The OBITools3 are now available to download from git, and will soon be on Nix ([pull request](https://github.com/NixOS/nixpkgs/pull/69644)). The OBITools3 are now available to download from git, and will soon be on Nix ([pull request](https://github.com/NixOS/nixpkgs/pull/69644)).
Requirements: **python3, python3-venv, git, CMake** First, make sure you have installed: **python3, python3-venv, git, CMake**
Then you can do: Then you can do:
git clone https://git.metabarcoding.org/obitools/obitools3.git git clone https://git.metabarcoding.org/obitools/obitools3.git
cd obitools3 cd obitools3
python3 -m venv obi3-env python3 -m venv obi3-env
. obi3-env/bin/activate source obi3-env/bin/activate
pip install cython pip install cython
python3 setup.py install python3 setup.py install
. obi_completion_script.sh source obi_completion_script.sh
And test the installation with: And test the installation with: