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Adds possibility to extract a taxonomy from taxonomic path included in sequence files

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This commit is contained in:
Eric Coissac
2025-01-30 11:18:21 +01:00
parent 2452aef7a9
commit 0df082da06
20 changed files with 460 additions and 173 deletions
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3
pkg/obitax/taxonset.go
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@ -212,7 +212,8 @@ func (set *TaxonSet) Sort() *TaxonSlice {
pushed = false
for _, node := range set.set {
if !parent[node] && (parent[set.Get(node.parent).Node] ||
!set.Contains(node.parent)) {
!set.Contains(node.parent) ||
node == taxonomy.Root().Node) {
pushed = true
taxa.slice = append(taxa.slice, node)
parent[node] = true