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Add some code refactoring from the blackboard branch

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This commit is contained in:
Eric Coissac
2024-08-02 12:35:46 +02:00
parent bc1aaaf7d9
commit 1b1cd41fd3
38 changed files with 491 additions and 330 deletions
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6
pkg/obiformats/csv_writer.go
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@ -142,7 +142,7 @@ func WriteCSV(iterator obiiter.IBioSequence,
nwriters := opt.ParallelWorkers()
obiiter.RegisterAPipe()
chunkchan := make(chan FileChunck)
chunkchan := make(chan FileChunk)
newIter.Add(nwriters)
var waitWriter sync.WaitGroup
@ -161,7 +161,7 @@ func WriteCSV(iterator obiiter.IBioSequence,
batch := iterator.Get()
chunkchan <- FileChunck{
chunkchan <- FileChunk{
FormatCVSBatch(batch, opt),
batch.Order(),
}
@ -171,7 +171,7 @@ func WriteCSV(iterator obiiter.IBioSequence,
}
next_to_send := 0
received := make(map[int]FileChunck, 100)
received := make(map[int]FileChunk, 100)
waitWriter.Add(1)
go func() {