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synced 2025-06-29 16:20:46 +00:00
Adds the possiblility to append to files to obidistribute
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@ -13,6 +13,7 @@ type __options__ struct {
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quality_shift int
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parallel_workers int
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closefile bool
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appendfile bool
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}
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type Options struct {
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@ -31,6 +32,7 @@ func MakeOptions(setters []WithOption) Options {
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parallel_workers: 4,
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batch_size: 5000,
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closefile: false,
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appendfile: false,
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}
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opt := Options{&o}
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@ -74,6 +76,10 @@ func (opt Options) CloseFile() bool {
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return opt.pointer.closefile
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}
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func (opt Options) AppendFile() bool {
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return opt.pointer.appendfile
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}
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func OptionsBufferSize(size int) WithOption {
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f := WithOption(func(opt Options) {
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opt.pointer.buffer_size = size
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@ -98,6 +104,22 @@ func OptionDontCloseFile() WithOption {
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return f
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}
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func OptionsAppendFile() WithOption {
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f := WithOption(func(opt Options) {
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opt.pointer.appendfile = true
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})
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return f
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}
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func OptionsNewFile() WithOption {
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f := WithOption(func(opt Options) {
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opt.pointer.appendfile = false
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})
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return f
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}
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// Allows to specify the ascii code corresponding to
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// a quality of 0 in fastq encoded quality scores.
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func OptionsQualityShift(shift int) WithOption {
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