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Big change iin the data model, and a first version of obiuniq

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This commit is contained in:
Eric Coissac
2022-02-21 19:00:23 +01:00
parent 9737f97084
commit 2e7c1834b0
43 changed files with 664 additions and 440 deletions
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6
pkg/obichunk/chunks.go
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@ -23,7 +23,7 @@ func ISequenceChunk(iterator obiseq.IBioSequenceBatch,
go func() {
newIter.Wait()
close(newIter.Channel())
newIter.Close()
}()
go func() {
@ -43,7 +43,7 @@ func ISequenceChunk(iterator obiseq.IBioSequenceBatch,
log.Fatalf("Cannot retreive the new chanel : %v", err)
}
chunk := obiseq.GetBioSequenceSlicePtr()
chunk := obiseq.NewBioSequenceSlice()
lock.Lock()
chunks[newflux] = chunk
lock.Unlock()
@ -64,7 +64,7 @@ func ISequenceChunk(iterator obiseq.IBioSequenceBatch,
for _, chunck := range chunks {
if len(*chunck) > 0 {
newIter.Channel() <- obiseq.MakeBioSequenceBatch(order, *chunck...)
newIter.Push(obiseq.MakeBioSequenceBatch(order, *chunck))
order++
}