obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2025-06-29 16:20:46 +00:00
Code Issues Packages Projects Releases Wiki Activity

Adds the ability to read gzip-tar file for the taxonomy dump

Browse Source
This commit is contained in:
Eric Coissac
2025-01-24 11:47:59 +01:00
parent ffd67252c3
commit 3137c1f841
17 changed files with 305 additions and 64 deletions
Download Patch File Download Diff File Expand all files Collapse all files

4
pkg/obiformats/embl_read.go
View File

@ -227,9 +227,9 @@ func ReadEMBLFromFile(filename string, options ...WithOption) (obiiter.IBioSeque
options = append(options, OptionsSource(obiutils.RemoveAllExt((path.Base(filename)))))
reader, err = Ropen(filename)
reader, err = obiutils.Ropen(filename)
if err == ErrNoContent {
if err == obiutils.ErrNoContent {
log.Infof("file %s is empty", filename)
return ReadEmptyFile(options...)
}