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second version of obidistribute and a first buggy version of obiuniq

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This commit is contained in:
Eric Coissac
2022-02-15 00:47:02 +01:00
parent b931321ba1
commit 3586ecc483
15 changed files with 402 additions and 21 deletions
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6
pkg/obiformats/universal_read.go
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@ -64,6 +64,12 @@ func ReadSequencesBatchFromFile(filename string, options ...WithOption) (obiseq.
tag, _ := breader.Peek(30)
if len(tag) < 30 {
newIter := obiseq.MakeIBioSequenceBatch()
close(newIter.Channel())
return newIter, nil
}
filetype := GuessSeqFileType(string(tag))
log.Printf("File guessed format : %s (tag: %s)",
filetype, (strings.Split(string(tag), "\n"))[0])