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second version of obidistribute and a first buggy version of obiuniq

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This commit is contained in:
Eric Coissac
2022-02-15 00:47:02 +01:00
parent b931321ba1
commit 3586ecc483
15 changed files with 402 additions and 21 deletions
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2
pkg/obiformats/universal_write.go
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@ -89,6 +89,7 @@ func WriteSequenceBatch(iterator obiseq.IBioSequenceBatch,
func WriteSequencesBatchToStdout(iterator obiseq.IBioSequenceBatch,
options ...WithOption) (obiseq.IBioSequenceBatch, error) {
options = append(options, OptionDontCloseFile())
return WriteSequenceBatch(iterator, os.Stdout, options...)
}
@ -103,5 +104,6 @@ func WriteSequencesBatchToFile(iterator obiseq.IBioSequenceBatch,
return obiseq.NilIBioSequenceBatch, err
}
options = append(options, OptionCloseFile())
return WriteSequenceBatch(iterator, file, options...)
}