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Adds the option --pairing-scale to obipairing

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Former-commit-id: c60416708467f5e818e70e08b3c512014b6212f0
This commit is contained in:
Eric Coissac
2023-12-07 12:28:16 +01:00
parent 008f33aee4
commit 37c3e16d5d
6 changed files with 42 additions and 27 deletions
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1
cmd/obitools/obipairing/main.go
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@ -41,6 +41,7 @@ func main() {
paired := obipairing.IAssemblePESequencesBatch(pairs,
obipairing.CLIGapPenality(),
obipairing.CLIPenalityScale(),
obipairing.CLIDelta(),
obipairing.CLIMinOverlap(),
obipairing.CLIMinIdentity(),

1
cmd/obitools/obitagpcr/main.go
View File

@ -44,6 +44,7 @@ func main() {
paired := obitagpcr.IPCRTagPESequencesBatch(pairs,
obipairing.CLIGapPenality(),
obipairing.CLIPenalityScale(),
obipairing.CLIDelta(),
obipairing.CLIMinOverlap(),
obipairing.CLIMinIdentity(),