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Complement on the doc

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This commit is contained in:
Eric Coissac
2023-01-27 10:49:28 +01:00
parent cfddc78161
commit 39b47a32bf
12 changed files with 485 additions and 29 deletions
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pkg/obialign/dnamatrix.go
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@ -56,7 +56,7 @@ func _MatchScoreRatio(a, b byte) (float64, float64) {
l2 := math.Log(2)
l3 := math.Log(3)
l10 := math.Log(10)
lalea := math.Log(30) // 1 /(change of the random model)
lalea := math.Log(4) // 1 /(change of the random model)
lE1 := -float64(a)/10*l10 - l3 // log proba of sequencing error on A/3
lE2 := -float64(b)/10*l10 - l3 // log proba of sequencing error on B/3
lO1 := math.Log1p(-math.Exp(lE1 + l3)) // log proba no being an error on A