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Patch a bug in fasta and fastq reading

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Former-commit-id: bcaa264b4c4a7c67617eb909b199176bf09913db
This commit is contained in:
Eric Coissac
2024-06-21 14:28:57 +02:00
parent 818ce87bab
commit 54a138196c
9 changed files with 85 additions and 44 deletions
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pkg/obitax/lca.go
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@ -43,7 +43,7 @@ func (t1 *TaxNode) LCA(t2 *TaxNode) (*TaxNode, error) {
}
func (taxonomy *Taxonomy) TaxonomicDistribution(sequence *obiseq.BioSequence) map[*TaxNode]int {
taxids := sequence.StatsOn("taxid", "na")
taxids := sequence.StatsOn(obiseq.MakeStatsOnDescription("taxid"), "na")
taxons := make(map[*TaxNode]int, len(taxids))
for k, v := range taxids {