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Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.

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Eric Coissac
2025-03-25 16:44:46 +01:00
parent 2ab6f67d58
commit 5a3705b6bb
52 changed files with 151 additions and 90 deletions
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2
pkg/obialign/alignment.go
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@ -169,7 +169,7 @@ func BuildQualityConsensus(seqA, seqB *obiseq.BioSequence, path []int, statOnMis
right = len(*bufferQA) - right
// log.Warnf("BuildQualityConsensus: left = %d right = %d\n", left, right)
// obilog.Warnf("BuildQualityConsensus: left = %d right = %d\n", left, right)
for i, qA = range *bufferQA {
nA := (*bufferSA)[i]