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Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.

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Eric Coissac
2025-03-25 16:44:46 +01:00
parent 2ab6f67d58
commit 5a3705b6bb
52 changed files with 151 additions and 90 deletions
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3
pkg/obifp/uint128.go
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@ -4,6 +4,7 @@ import (
"math"
"math/bits"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obilog"
log "github.com/sirupsen/logrus"
)
@ -46,7 +47,7 @@ func (u Uint128) IsZero() bool {
// Returns a Uint64 value.
func (u Uint128) Uint64() Uint64 {
if u.w1 != 0 {
log.Warnf("Uint128 overflow at Uint64(%v)", u)
obilog.Warnf("Uint128 overflow at Uint64(%v)", u)
}
return Uint64{w0: u.w0}
}

5
pkg/obifp/uint256.go
View File

@ -4,6 +4,7 @@ import (
"math"
"math/bits"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obilog"
log "github.com/sirupsen/logrus"
)
@ -51,7 +52,7 @@ func (u Uint256) IsZero() bool {
// Returns a Uint64 value.
func (u Uint256) Uint64() Uint64 {
if u.w3 != 0 || u.w2 != 0 || u.w1 != 0 {
log.Warnf("Uint256 overflow at Uint64(%v)", u)
obilog.Warnf("Uint256 overflow at Uint64(%v)", u)
}
return Uint64{w0: u.w0}
}
@ -64,7 +65,7 @@ func (u Uint256) Uint64() Uint64 {
// Returns a Uint128 value.
func (u Uint256) Uint128() Uint128 {
if u.w3 != 0 || u.w2 != 0 {
log.Warnf("Uint256 overflow at Uint128(%v)", u)
obilog.Warnf("Uint256 overflow at Uint128(%v)", u)
}
return Uint128{u.w1, u.w0}
}

5
pkg/obifp/uint64.go
View File

@ -4,6 +4,7 @@ import (
"math"
"math/bits"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obilog"
log "github.com/sirupsen/logrus"
)
@ -100,7 +101,7 @@ func (u Uint64) LeftShift64(n uint, carryIn uint64) (value, carry uint64) {
}
log.Warnf("Uint64 overflow at LeftShift64(%v, %v)", u, n)
obilog.Warnf("Uint64 overflow at LeftShift64(%v, %v)", u, n)
return 0, 0
}
@ -129,7 +130,7 @@ func (u Uint64) RightShift64(n uint, carryIn uint64) (value, carry uint64) {
return carryIn, u.w0 >> (n - 64)
}
log.Warnf("Uint64 overflow at RightShift64(%v, %v)", u, n)
obilog.Warnf("Uint64 overflow at RightShift64(%v, %v)", u, n)
return 0, 0
}