Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands.

pkg/obioptions/options.go

@@ -73,6 +73,11 @@ func GenerateOptionParser(program string,
 		options.GetEnv("OBISOLEXA"),
 		options.Description("Decodes quality string according to the Solexa specification."))
 
+	options.BoolVar(obidefault.SilentWarningPtr(), "silent-warning", obidefault.SilentWarning(),
+		options.GetEnv("OBIWARNING"),
+		options.Description("Stop printing of the warning message"),
+	)
+
 	for _, o := range optionset {
 		o(options)
 	}

pkg/obioptions/version.go

@@ -8,7 +8,7 @@ import (
 // corresponds to the last commit, and not the one when the file will be
 // commited
 
-var _Commit = "8b379d3"
+var _Commit = "2ab6f67"
 var _Version = "Release 4.4.0"
 
 // Version returns the version of the obitools package.