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Patch the empty batch bug

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Former-commit-id: fcee04b58f2c4a0bf2c27792f991391c0b6ce78e
This commit is contained in:
Eric Coissac
2023-03-07 20:16:06 +07:00
parent 1e7756ec91
commit 5fbe52368c
6 changed files with 11 additions and 35 deletions
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3
pkg/obiformats/fastseq_write_fastq.go
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@ -56,6 +56,9 @@ type FileChunck struct {
func WriteFastq(iterator obiiter.IBioSequence,
file io.WriteCloser,
options ...WithOption) (obiiter.IBioSequence, error) {
iterator = iterator.Rebatch(10000)
opt := MakeOptions(options)
file, _ = goutils.CompressStream(file, opt.CompressedFile(), opt.CloseFile())