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Merge branch 'master' of git.metabarcoding.org:obitools/obitools4/obitools4

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Eric Coissac
2023-02-23 23:50:57 +01:00
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@ -33,7 +33,7 @@
- Some OBITools (now `obigrep` and `obiconvert`) are capable of using paired read files. - Some OBITools (now `obigrep` and `obiconvert`) are capable of using paired read files.
Options have been added for this (**--paired-with** _FILENAME_, and **--paired-mode** _forward|reverse|and|andnot|xor_). This, in combination with the **--out** option shown above, ensures that the two matched files remain consistent when processed. Options have been added for this (**--paired-with** _FILENAME_, and **--paired-mode** _forward|reverse|and|andnot|xor_). This, in combination with the **--out** option shown above, ensures that the two matched files remain consistent when processed.
## February $18^th$, 2023. Release 4.0.0 ## February 18th, 2023. Release 4.0.0
It is the first version of the *OBITools* version 4. I decided to tag then following two weeks It is the first version of the *OBITools* version 4. I decided to tag then following two weeks
of intensive data analysis with them allowing to discover many small bugs present in the previous of intensive data analysis with them allowing to discover many small bugs present in the previous
@ -59,4 +59,4 @@ to use the git ticket system to mention them. But they seems to produce now reli
- Adding of a `--directory|-d` option to the `obidistribute` tool. It allows to declare a secondary - Adding of a `--directory|-d` option to the `obidistribute` tool. It allows to declare a secondary
classification key over the one defined by the '--category|-c` option. This extra key leads to produce classification key over the one defined by the '--category|-c` option. This extra key leads to produce
directories in which files produced according to the primary criterion are stored. directories in which files produced according to the primary criterion are stored.
- Adding of the functions `subspc`, `printf`, `int`, `numeric`, and `bool` to the expression language. - Adding of the functions `subspc`, `printf`, `int`, `numeric`, and `bool` to the expression language.