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Remove single sequence ierators. Only batch iterators persist

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This commit is contained in:
Eric Coissac
2022-11-16 10:58:59 +01:00
parent f674200a6e
commit 6f853da9df
14 changed files with 4 additions and 651 deletions
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14
pkg/obiformats/ecopcr_read.go
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@ -5,11 +5,12 @@ import (
"encoding/csv"
"fmt"
"io"
log "github.com/sirupsen/logrus"
"os"
"strconv"
"strings"
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
)
@ -206,11 +207,6 @@ func ReadEcoPCRBatch(reader io.Reader, options ...WithOption) obiiter.IBioSequen
return newIter
}
func ReadEcoPCR(reader io.Reader, options ...WithOption) obiiter.IBioSequence {
ib := ReadEcoPCRBatch(reader, options...)
return ib.SortBatches().IBioSequence()
}
func ReadEcoPCRBatchFromFile(filename string, options ...WithOption) (obiiter.IBioSequenceBatch, error) {
var reader io.Reader
var greader io.Reader
@ -230,9 +226,3 @@ func ReadEcoPCRBatchFromFile(filename string, options ...WithOption) (obiiter.IB
return ReadEcoPCRBatch(reader, options...), nil
}
func ReadEcoPCRFromFile(filename string, options ...WithOption) (obiiter.IBioSequence, error) {
ib, err := ReadEcoPCRBatchFromFile(filename, options...)
return ib.SortBatches().IBioSequence(), err
}