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Remove single sequence ierators. Only batch iterators persist

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This commit is contained in:
Eric Coissac
2022-11-16 10:58:59 +01:00
parent f674200a6e
commit 6f853da9df
14 changed files with 4 additions and 651 deletions
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28
pkg/obiiter/workers.go
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@ -153,34 +153,6 @@ func (iterator IBioSequenceBatch) MakeISliceWorker(worker SeqSliceWorker, sizes
return newIter
}
func (iterator IBioSequence) MakeIWorker(worker SeqWorker, sizes ...int) IBioSequence {
buffsize := iterator.BufferSize()
if len(sizes) > 0 {
buffsize = sizes[0]
}
newIter := MakeIBioSequence(buffsize)
newIter.Add(1)
go func() {
newIter.Wait()
close(newIter.pointer.channel)
}()
go func() {
for iterator.Next() {
seq := iterator.Get()
seq = worker(seq)
newIter.pointer.channel <- seq
}
newIter.Done()
}()
return newIter
}
func WorkerPipe(worker SeqWorker, sizes ...int) Pipeable {
f := func(iterator IBioSequenceBatch) IBioSequenceBatch {
return iterator.MakeIWorker(worker, sizes...)