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Add _ to allowed in taxid

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This commit is contained in:
Eric Coissac
2025-06-06 14:37:57 +02:00
parent d31e677304
commit 7b23985693
3 changed files with 5 additions and 2 deletions
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4
pkg/obitax/taxonomy.go
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@ -42,6 +42,8 @@ type Taxonomy struct {
index map[*string]*TaxonSet
}
var DefaultTaxidAlphabet = obiutils.AsciiAlphaNumSet.Union(obiutils.AsciiUnderScore)
// NewTaxonomy creates and initializes a new Taxonomy instance with the specified name and code.
// It sets up the necessary internal structures, including ranks, nodes, aliases, and an index.
//
@ -365,7 +367,7 @@ func (taxonomy *Taxonomy) InsertPathString(path []string) (*Taxonomy, error) {
code, taxid, scientific_name, rank, err := ParseTaxonString(path[0])
if taxonomy == nil {
taxonomy = NewTaxonomy(code, code, obiutils.AsciiAlphaNumSet)
taxonomy = NewTaxonomy(code, code, DefaultTaxidAlphabet)
}
if err != nil {