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small refactoring including doc

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Former-commit-id: 6d6b527d89d77aa571831f7500f841840e280536
This commit is contained in:
Eric Coissac
2023-08-27 15:52:28 +02:00
parent f1025f97b8
commit 7b7128196a
4 changed files with 17 additions and 8 deletions
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4
pkg/obitax/lca.go
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@ -43,7 +43,7 @@ func (taxonomy *Taxonomy) TaxonomicDistribution(sequence *obiseq.BioSequence) ma
t, et := taxonomy.Taxon(taxid)
if et != nil {
log.Panic("Taxid %d not defined in taxonomy : %v", k, et)
log.Panicf("Taxid %d not defined in taxonomy : %v", k, et)
}
taxons[t] = v
}
@ -60,7 +60,7 @@ func (taxonomy *Taxonomy) LCA(sequence *obiseq.BioSequence, threshold float64) (
for t, w := range taxons {
p, ep := t.Path()
if ep != nil {
log.Panic("Taxonomic path cannot be retreived from Taxid %d : %v", t.Taxid(), ep)
log.Panicf("Taxonomic path cannot be retreived from Taxid %d : %v", t.Taxid(), ep)
}
obiutils.Reverse(*p, true)