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introduce obidefault

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This commit is contained in:
Eric Coissac
2025-01-27 17:12:45 +01:00
parent 0a567f621c
commit 7c4042df6b
69 changed files with 505 additions and 479 deletions
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4
pkg/obiapat/pcr.go
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@ -3,7 +3,7 @@ package obiapat
import (
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiutils"
)
@ -104,7 +104,7 @@ func MakeOptions(setters []WithOption) Options {
extension: -1,
fullExtension: false,
circular: false,
parallelWorkers: obioptions.CLIParallelWorkers(),
parallelWorkers: obidefault.ParallelWorkers(),
batchSize: 100,
forward: NilApatPattern,
cfwd: NilApatPattern,