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introduce obidefault

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This commit is contained in:
Eric Coissac
2025-01-27 17:12:45 +01:00
parent 0a567f621c
commit 7c4042df6b
69 changed files with 505 additions and 479 deletions
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6
pkg/obiformats/options.go
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@ -1,7 +1,7 @@
package obiformats
import (
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
)
@ -49,8 +49,8 @@ func MakeOptions(setters []WithOption) Options {
seqBatchFormater: nil,
with_progress_bar: false,
buffer_size: 2,
parallel_workers: obioptions.CLIReadParallelWorkers(),
batch_size: obioptions.CLIBatchSize(),
parallel_workers: obidefault.ReadParallelWorkers(),
batch_size: obidefault.BatchSize(),
total_seq_size: 1024 * 1024 * 100, // 100 MB by default
no_order: false,
full_file_batch: false,