obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2025-06-29 16:20:46 +00:00
Code Issues Packages Projects Releases Wiki Activity

introduce obidefault

Browse Source
This commit is contained in:
Eric Coissac
2025-01-27 17:12:45 +01:00
parent 0a567f621c
commit 7c4042df6b
69 changed files with 505 additions and 479 deletions
Download Patch File Download Diff File Expand all files Collapse all files

4
pkg/obiiter/distribute.go
View File

@ -4,7 +4,7 @@ import (
"fmt"
"sync"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obioptions"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obidefault"
"git.metabarcoding.org/obitools/obitools4/obitools4/pkg/obiseq"
)
@ -74,7 +74,7 @@ func (dist *IDistribute) Classifier() *obiseq.BioSequenceClassifier {
// It ensures that the outputs are closed and cleaned up once
// processing is complete.
func (iterator IBioSequence) Distribute(class *obiseq.BioSequenceClassifier, sizes ...int) IDistribute {
batchsize := obioptions.CLIBatchSize()
batchsize := obidefault.BatchSize()
outputs := make(map[int]IBioSequence, 100)
slices := make(map[int]*obiseq.BioSequenceSlice, 100)