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Patch a bug leading to loose taxonomical identification (set to root) when best_id = 1

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Former-commit-id: 8eb4f95d4df774563f5a5fe17d2c9c8836361caa
This commit is contained in:
Eric Coissac
2023-11-30 13:07:51 +01:00
parent 8d77cc4133
commit 82040dbe55
1 changed files with 2 additions and 2 deletions
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4
pkg/obitools/obitag/obitag.go
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@ -146,7 +146,7 @@ func FindClosests(sequence *obiseq.BioSequence,
} }
log.Debugln("Closest Match", sequence.Id(), maxe, bestId, bestidxs, len(bests)) // log.Debugln("Closest Match", sequence.Id(), maxe, bestId, bestidxs, len(bests))
return bests, maxe, bestId, bestmatch, bestidxs return bests, maxe, bestId, bestmatch, bestidxs
} }
@ -171,7 +171,7 @@ func Identify(sequence *obiseq.BioSequence,
bests, differences, identity, bestmatch, seqidxs := FindClosests(sequence, references, refcounts, runExact) bests, differences, identity, bestmatch, seqidxs := FindClosests(sequence, references, refcounts, runExact)
taxon := (*obitax.TaxNode)(nil) taxon := (*obitax.TaxNode)(nil)
if identity >= 0.5 && differences > 0 { if identity >= 0.5 && differences >= 0 {
newidx := 0 newidx := 0
for i, best := range bests { for i, best := range bests {
idx := best.OBITagRefIndex() idx := best.OBITagRefIndex()