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Adds the new obicomplement command

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This commit is contained in:
Eric Coissac
2022-10-05 09:40:09 +02:00
parent 7873b90902
commit 935fc31982
1 changed files with 21 additions and 0 deletions
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21
cmd/obitools/obicomplement/main.go Normal file
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package main
import (
"os"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obitools/obiconvert"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obioptions"
)
func main() {
optionParser := obioptions.GenerateOptionParser(obiconvert.OptionSet)
_, args, _ := optionParser(os.Args)
fs, _ := obiconvert.ReadBioSequencesBatch(args...)
comp := fs.MakeIWorker(obiiter.ReverseComplementWorker(true))
obiconvert.WriteBioSequencesBatch(comp, true)
}