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before big changes

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This commit is contained in:
Eric Coissac
2022-02-18 22:53:09 +01:00
parent 37ce3536e1
commit 9737f97084
15 changed files with 234 additions and 91 deletions
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4
pkg/obichunk/chunk_on_disk.go
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@ -34,7 +34,7 @@ func find(root, ext string) []string {
}
func ISequenceChunkOnDisk(iterator obiseq.IBioSequenceBatch,
classifier obiseq.BioSequenceClassifier,
classifier *obiseq.BioSequenceClassifier,
sizes ...int) (obiseq.IBioSequenceBatch, error) {
dir, err := tempDir()
if err != nil {
@ -78,7 +78,7 @@ func ISequenceChunkOnDisk(iterator obiseq.IBioSequenceBatch,
panic(err)
}
chunck := make(obiseq.BioSequenceSlice, 0, 1000)
chunck := make(obiseq.BioSequenceSlice, 0, 10000)
for iseq.Next() {
b := iseq.Get()