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before big changes

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This commit is contained in:
Eric Coissac
2022-02-18 22:53:09 +01:00
parent 37ce3536e1
commit 9737f97084
15 changed files with 234 additions and 91 deletions
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14
pkg/obichunk/unique.go
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@ -34,6 +34,7 @@ func IUniqueSequence(iterator obiseq.IBioSequenceBatch,
}
nworkers := opts.ParallelWorkers()
iUnique.Add(nworkers)
go func() {
@ -52,17 +53,26 @@ func IUniqueSequence(iterator obiseq.IBioSequenceBatch,
return neworder
}
var ff func(obiseq.IBioSequenceBatch, obiseq.BioSequenceClassifier, int)
var ff func(obiseq.IBioSequenceBatch, *obiseq.BioSequenceClassifier, int)
cat := opts.Categories()
na := opts.NAValue()
// ff = func(input obiseq.IBioSequenceBatch,
// classifier obiseq.BioSequenceClassifier,
// icat int) {
// log.Println(na, nextOrder)
// input.Recycle()
// iUnique.Done()
// }
ff = func(input obiseq.IBioSequenceBatch,
classifier obiseq.BioSequenceClassifier,
classifier *obiseq.BioSequenceClassifier,
icat int) {
icat--
input, err = ISequenceSubChunk(input,
classifier,
1,
opts.BufferSize())
var next obiseq.IBioSequenceBatch