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Start to use leveled log

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This commit is contained in:
Eric Coissac
2022-02-24 12:14:52 +01:00
parent f18cc034bb
commit abcf02e488
43 changed files with 156 additions and 67 deletions
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7
pkg/obiformats/universal_read.go
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@ -4,10 +4,11 @@ import (
"bufio"
"compress/gzip"
"io"
"log"
"os"
"strings"
log "github.com/sirupsen/logrus"
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiiter"
)
@ -57,7 +58,7 @@ func ReadSequencesBatchFromFile(filename string,
if err != nil {
file.Seek(0, 0)
} else {
log.Printf("File %s is gz compressed ", filename)
log.Debugf("File %s is gz compressed ", filename)
reader = greader
}
@ -72,7 +73,7 @@ func ReadSequencesBatchFromFile(filename string,
}
filetype := GuessSeqFileType(string(tag))
log.Printf("File guessed format : %s (tag: %s)",
log.Debug("File guessed format : %s (tag: %s)",
filetype, (strings.Split(string(tag), "\n"))[0])
reader = breader