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Add the --number option to obiannotate

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This commit is contained in:
Eric Coissac
2025-04-22 18:35:51 +02:00
parent a57cfda675
commit c0ecaf90ab
5 changed files with 78 additions and 2 deletions
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5
cmd/obitools/obiannotate/main.go
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@ -42,6 +42,11 @@ func main() {
obiconvert.OpenSequenceDataErrorMessage(args, err)
annotator := obiannotate.CLIAnnotationPipeline()
if obiannotate.CLIHasSetNumberFlag() {
sequences = sequences.NumberSequences(1, !obiconvert.CLINoInputOrder())
}
obiconvert.CLIWriteBioSequences(sequences.Pipe(annotator), true)
obiutils.WaitForLastPipe()