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Merge branch 'master' into taxonomy

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This commit is contained in:
Eric Coissac
2024-12-20 20:06:57 +01:00
parent 5d0f996625 f2525d7b07
commit ccd3b06532
20 changed files with 286 additions and 54 deletions
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9
pkg/obioptions/options.go
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@ -30,6 +30,7 @@ var _PprofMudex = 10
var _PprofGoroutine = 6060
var _Quality_Shift_Input = byte(33)
var _Quality_Shift_Output = byte(33)
var _Read_Qualities = true
var __taxdump__ = ""
var __alternative_name__ = false
@ -291,6 +292,10 @@ func CLIBatchSize() int {
return _BatchSize
}
func CLIReadQualities() bool {
return _Read_Qualities
}
// SetDebugOn sets the debug mode on.
func SetDebugOn() {
_Debug = true
@ -301,6 +306,10 @@ func SetDebugOff() {
_Debug = false
}
func SetReadQualities(status bool) {
_Read_Qualities = status
}
// SetWorkerPerCore sets the number of workers per CPU core.
//
// It takes a float64 parameter representing the number of workers