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Small bug in sequence counting on merge

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This commit is contained in:
Eric Coissac
2022-05-30 16:28:59 +02:00
parent f14860a486
commit cf5b4baa54
5 changed files with 21 additions and 4 deletions
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2
pkg/obichunk/subchunks.go
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@ -11,7 +11,7 @@ import (
)
//
// Interface for sorting a list of sequences accoording to
// Interface for sorting a list of sequences according to
// their classes
//

7
pkg/obichunk/unique.go
View File

@ -9,6 +9,9 @@ import (
"git.metabarcoding.org/lecasofts/go/obitools/pkg/obiseq"
)
// Runs dereplication algorithm on a obiiter.IBioSequenceBatch
// iterator.
func IUniqueSequence(iterator obiiter.IBioSequenceBatch,
options ...WithOption) (obiiter.IBioSequenceBatch, error) {
@ -62,7 +65,9 @@ func IUniqueSequence(iterator obiiter.IBioSequenceBatch,
return neworder
}
var ff func(obiiter.IBioSequenceBatch, *obiseq.BioSequenceClassifier, int)
var ff func(obiiter.IBioSequenceBatch,
*obiseq.BioSequenceClassifier,
int)
cat := opts.Categories()
na := opts.NAValue()